Ex. 1 - Background questionnaire generation2 years ago
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Ex. 4 - Generating cluster samples2 years ago
Generating background questionnaire data | Example 1 | Example 2 | Example 3 | Example 4 | Example 5 | Example 6 | Example 7 | Example 8
Improving the Chacko (1966) test3 years ago
Chacko's ordering process | Calculating $p$-values | Permutation test
toy-example3 years ago
TOY EXAMPLE | Generate the data | Run Sparse Functional Clustering (no alignment) | Plot / explore results
Sampling and ML estimation3 years ago
Using TruncExpFam | Sampling from a truncated distribution | Different ways to do the same thing | Actually sampling from a truncated distribution | Recovering the original parameters
Ex. 2 - Understanding the elements in output5 years ago
Ex. 3 - Retrieving regression coefficients5 years ago
cellmigRation5 years ago
Introduction | Summary | Notes and Acknowledgmenets | More resources | Reproducibility | Installation | cellmigRation Pipeline | Required libraries | Module 1 | Importing TIFF files | Optimizing Tracking Params | Tracking Cell Movements | Basic migration stats | Basic Visualizations | Aggregate Cell Tracks | Module 2 | Import and Pre-process Cell Tracks | Plotting tracks (2D and 3D) | 3D Plots | Deep Trajectory Analysis | Final Results | Principal Component Analysis (PCA) and Cell Clustering | Session & Environment
